BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008B04SP1|AL425807
(774 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig635 1532 0.0
>3x_Contig635
Length = 2061
Score = 1532 bits (772), Expect = 0.0
Identities = 773/774 (99%)
Strand = Plus / Minus
Query: 1 acgaaaggatcagatctggttccagactatttatctttgtgctgtgtgaactgagagtta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1385 acgaaaggatcagatctggttccagactatttatctttgtgctgtgtgaactgagagtta 1326
Query: 61 tcaaatcagagtcatttttagtctccccagtagccaacaacttgattgggttgacaatcg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1325 tcaaatcagagtcatttttagtctccccagtagccaacaacttgattgggttgacaatcg 1266
Query: 121 ctgctgccatcgatgggttcccagtctccacatcggtcatttcgtcatcatcaaattccg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1265 ctgctgccatcgatgggttcccagtctccacatcggtcatttcgtcatcatcaaattccg 1206
Query: 181 cattgtgagaagaaactgtggcaggagcatgttcagcatgcgcatgcggaagaccagcac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1205 cattgtgagaagaaactgtggcaggagcatgttcagcatgcgcatgcggaagaccagcac 1146
Query: 241 catgagacgtggatactggttctgaattcctcaatataggtaccgttggttttcgggacc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1145 catgagacgtggatactggttctgaattcctcaatataggtaccgttggttttcgggacc 1086
Query: 301 agaagtacttcttcttgaagatctgctgaggttcatcatccgatatgaggtctctattgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1085 agaagtacttcttcttgaagatctgctgaggttcatcatccgatatgaggtctctattgt 1026
Query: 361 tgttgttcctgaacatcttattcaatttgaatagtttcttcaccccactgttaccagtac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1025 tgttgttcctgaacatcttattcaatttgaatagtttcttcaccccactgttaccagtac 966
Query: 421 catcattctcatcgtccaaatccaagttcatggacacatcttcatccaatccagataaca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 965 catcattctcatcgtccaaatccaagttcatggacacatcttcatccaatccagataaca 906
Query: 481 acaatgccattgaattcgttgtatgtggtactgtctgcgttgcatcgttcacagattttg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 905 acaatgccattgaattcgttgtatgtggtactgtctgcgttgcatcgttcacagattttg 846
Query: 541 accccacgttgacaaaaattgactcttgatccatgtcgatatcaaactcgttatcctcat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 845 accccacgttgacaaaaattgactcttgatccatgtcgatatcaaactcgttatcctcat 786
Query: 601 cagaaaacacagatccggacctagaactacccatgcscccaagattacctaccctactac 660
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 785 cagaaaacacagatccggacctagaactacccatgcccccaagattacctaccctactac 726
Query: 661 tactaccgttcatcacatctttgttgaaaaactcatactcatagtacattggatcgtcac 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 tactaccgttcatcacatctttgttgaaaaactcatactcatagtacattggatcgtcac 666
Query: 721 gatggtactcgcttatcgataaccttctgatatcgtcgcccatggccctgattg 774
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 gatggtactcgcttatcgataaccttctgatatcgtcgcccatggccctgattg 612
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6286
Number of Sequences: 1807
Number of extensions: 6286
Number of successful extensions: 43
Number of sequences better than 1.0e-20: 1
length of query: 774
length of database: 10,358,551
effective HSP length: 16
effective length of query: 758
effective length of database: 10,329,639
effective search space: 7829866362
effective search space used: 7829866362
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)